559 lines
16 KiB
C++
559 lines
16 KiB
C++
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/*
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----
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This file is part of SECONDO.
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Copyright (C) 2014, University in Hagen,
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Faculty of Mathematic and Computer Science,
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Database Systems for New Applications.
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SECONDO is free software; you can redistribute it and/or modify
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it under the terms of the GNU General Public License as published by
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the Free Software Foundation; either version 2 of the License, or
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(at your option) any later version.
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SECONDO is distributed in the hope that it will be useful,
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but WITHOUT ANY WARRANTY; without even the implied warranty of
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MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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GNU General Public License for more details.
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You should have received a copy of the GNU General Public License
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along with SECONDO; if not, write to the Free Software
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Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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----
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*/
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#include "StandardTypes.h"
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#include "Algebras/RTree/RTreeAlgebra.h"
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#include "Algebras/Relation-C++/RelationAlgebra.h"
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#include "NestedList.h"
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#include "Algebras/Rectangle/RectangleAlgebra.h"
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#include "Algebra.h"
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#include "QueryProcessor.h"
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#include "ListUtils.h"
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#include "Stream.h"
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#include <queue>
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extern NestedList* nl;
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extern QueryProcessor* qp;
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/*
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Type mapping
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*/
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ListExpr closestPairsTM(ListExpr args){
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// arg 1 : rtree 1
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// arg 2 : relation 1
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// arg 3 : rtree 2
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// arg 4 : relation 2
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// arg 5 : k (integer) (how many pairs should be found)#
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// optional arg 6: suffix for second relation to avoid name conflicts
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std::string err = "expected: rtree x rel x rtree x rel x int [x suffix]";
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if(!nl->HasLength(args,5) && !nl->HasLength(args,6)){
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return listutils::typeError(err);
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}
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if( !R_Tree<2,TupleId>::checkType(nl->First(args))
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|| !Relation::checkType(nl->Second(args))
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|| !R_Tree<2,TupleId>::checkType(nl->Third(args))
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|| !Relation::checkType(nl->Fourth(args))
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|| !CcInt::checkType(nl->Fifth(args))){
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return listutils::typeError(err);
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}
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ListExpr attrList = nl->TheEmptyList();
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if(nl->HasLength(args,5)){
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attrList = listutils::concat(
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nl->Second(nl->Second(nl->Second(args))),
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nl->Second(nl->Second(nl->Fourth(args))));
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} else {
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ListExpr sfx = nl->Sixth(args);
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if(nl->AtomType(sfx) != SymbolType){
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return listutils::typeError("The 6th argument must be a symbol");
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}
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std::string suffix = nl->SymbolValue(sfx);
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ListExpr attrList1 = nl->Second(nl->Second(nl->Second(args)));
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ListExpr attrList2 = nl->Second(nl->Second(nl->Fourth(args)));
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// append attrList1
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attrList = nl->OneElemList(nl->First(attrList1));
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ListExpr last = attrList;
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attrList1 = nl->Rest(attrList1);
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while(!nl->IsEmpty(attrList1)){
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last = nl->Append(last, nl->First(attrList1));
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attrList1 = nl->Rest(attrList1);
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}
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// append renamed attrList2;
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suffix = std::string("_")+suffix;
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while(!nl->IsEmpty(attrList2)){
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ListExpr first = nl->First(attrList2);
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attrList2 = nl->Rest(attrList2);
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ListExpr newName = nl->SymbolAtom( nl->SymbolValue(nl->First(first))
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+ suffix);
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ListExpr app = nl->TwoElemList( newName, nl->Second(first));
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last = nl->Append(last,app);
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}
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}
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if(!listutils::isAttrList(attrList)){
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return listutils::typeError("problem in concatenating attribute "
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"lists (may be name conflicts)");
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}
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return nl->TwoElemList(
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listutils::basicSymbol<Stream<Tuple> >(),
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nl->TwoElemList(
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listutils::basicSymbol<Tuple>(),
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attrList));
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}
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/*
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Heap Entry for pairs of node entries.
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*/
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class closestPairEntry{
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public:
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closestPairEntry(R_TreeLeafEntry<2,TupleId>& e1, int _level1,
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R_TreeLeafEntry<2,TupleId>& e2, int _level2):
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id1(0), rect1(e1.box), tid1(e1.info), level1(_level1),
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id2(0), rect2(e2.box), tid2(e2.info), level2(_level2){
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computeDistances();
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}
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closestPairEntry(R_TreeLeafEntry<2,TupleId>& e1, int _level1,
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R_TreeInternalEntry<2>& e2, int _level2):
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id1(0), rect1(e1.box), tid1(e1.info),level1(_level1),
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id2(e2.pointer), rect2(e2.box), tid2(0), level2(_level2) {
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computeDistances();
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}
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closestPairEntry(R_TreeInternalEntry<2>& e1, int _level1,
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R_TreeInternalEntry<2>& e2, int _level2):
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id1(e1.pointer), rect1(e1.box), tid1(0), level1(_level1),
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id2(e2.pointer), rect2(e2.box), tid2(0), level2(_level2){
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computeDistances();
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}
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closestPairEntry(R_TreeInternalEntry<2>& e1, int _level1,
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R_TreeLeafEntry<2,TupleId>& e2, int _level2):
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id1(e1.pointer), rect1(e1.box), tid1(0), level1(_level1),
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id2(0), rect2(e2.box), tid2(e2.info), level2(_level2){
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computeDistances();
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}
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closestPairEntry(closestPairEntry e,
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R_TreeLeafEntry<2,TupleId>& e2, int _level2):
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id1(e.id1), rect1(e.rect1), tid1(e.tid1), level1(e.level1),
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id2(0), rect2(e2.box), tid2(e2.info), level2(_level2){
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computeDistances();
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}
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closestPairEntry(closestPairEntry e,
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R_TreeInternalEntry<2>& e2, int _level2):
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id1(e.id1), rect1(e.rect1), tid1(e.tid1), level1(e.level1),
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id2(e2.pointer), rect2(e2.box), tid2(0), level2(_level2){
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computeDistances();
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}
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closestPairEntry( R_TreeLeafEntry<2,TupleId>& e1, int _level1,
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closestPairEntry e):
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id1(0), rect1(e1.box), tid1(e1.info),level1(_level1),
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id2(e.id2), rect2(e.rect2), tid2(e.tid2), level2(e.level2){
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computeDistances();
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}
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closestPairEntry( R_TreeInternalEntry<2>& e1, int _level1,
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closestPairEntry e):
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id1(e1.pointer), rect1(e1.box), tid1(0),level1(_level1),
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id2(e.id2), rect2(e.rect2), tid2(e.tid2), level2(e.level2){
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computeDistances();
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}
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double getMinDist()const {
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return minDist;
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}
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bool isFinal() const{
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return (tid1>0) && (tid2>0);
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}
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bool final1() const{
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return tid1>0;
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}
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bool final2() const{
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return tid2>0;
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}
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TupleId getTid1() const{
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return tid1;
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}
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TupleId getTid2() const{
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return tid2;
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}
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SmiRecordId getPointer1() const{
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return id1;
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}
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SmiRecordId getPointer2() const{
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return id2;
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}
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int getLevel1(){
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return level1;
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}
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int getLevel2(){
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return level2;
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}
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private:
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SmiRecordId id1; // pointer to son
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Rectangle<2> rect1; // mbr
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TupleId tid1; // pointer to relation
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int level1;
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SmiRecordId id2;
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Rectangle<2> rect2;
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TupleId tid2;
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int level2;
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double minDist;
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double minmaxdist;
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double maxmaxdist;
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void computeDistances(){
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minDist=rect1.Distance(rect2);
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maxmaxdist = rect1.QMaxMaxDistance(rect2);
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minmaxdist = rect2.QMinMaxDistance(rect2);
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}
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double dist(double* a1, double*a2, int dim){
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double res = 0;
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for(int i=0;i<dim;i++){
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double d = a1[i] - a2[i];
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res += d*d;
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}
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return res;
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}
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};
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/*
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Comparison function
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*/
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class closestPairEntryLess{
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public:
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bool operator()(const closestPairEntry& e1,
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const closestPairEntry& e2){
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return e1.getMinDist() > e2.getMinDist();
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}
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};
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/*
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LocalInfo
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*/
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class ClosestPairLocalInfo{
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public:
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ClosestPairLocalInfo(R_Tree<2,TupleId>* _t1,
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Relation* _r1,
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R_Tree<2,TupleId>* _t2,
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Relation* _r2,
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int _k,
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ListExpr resType):
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t1(_t1), r1(_r1), t2(_t2), r2(_r2) , k(_k), count(0) {
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tt = new TupleType(resType);
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init();
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}
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Tuple* nextTuple(){
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if(count==k && k>=0) {
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return 0;
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}
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if(heap.empty()){
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return 0;
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}
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return produceNextTuple();
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}
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~ClosestPairLocalInfo(){
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tt->DeleteIfAllowed();
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}
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private:
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R_Tree<2,TupleId>* t1;
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Relation* r1;
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R_Tree<2,TupleId>* t2;
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Relation* r2;
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int k;
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int count;
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TupleType* tt;
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std::priority_queue<closestPairEntry,
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std::vector<closestPairEntry> ,
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closestPairEntryLess> heap;
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void init(){
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count = 0;
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while(!heap.empty()){
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heap.pop();
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}
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R_TreeNode<2,TupleId> root1 = t1->Root();
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R_TreeNode<2,TupleId> root2 = t2->Root();
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insertPair(root1,0, root2,0);
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}
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void insertPair(R_TreeNode<2,TupleId>& node1, int level1,
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R_TreeNode<2,TupleId>& node2, int level2){
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if(node1.IsLeaf() && node2.IsLeaf()){
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for( int i1=0; i1 < node1.EntryCount(); i1++){
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R_TreeLeafEntry<2,TupleId> e1 = *(node1.GetLeafEntry(i1));
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for( int i2=0; i2<node2.EntryCount(); i2++){
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R_TreeLeafEntry<2,TupleId> e2 = *(node2.GetLeafEntry(i2));
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closestPairEntry entry(e1,level1+1,e2, level2+1);
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if(!prune(entry)){
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heap.push(entry);
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}
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}
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}
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}
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if(node1.IsLeaf() && !node2.IsLeaf()){
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for( int i1=0; i1 < node1.EntryCount(); i1++){
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R_TreeLeafEntry<2,TupleId> e1 = *(node1.GetLeafEntry(i1));
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for( int i2=0; i2<node2.EntryCount(); i2++){
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R_TreeInternalEntry<2> e2 = *(node2.GetInternalEntry(i2));
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closestPairEntry entry(e1,level1+1,e2,level2+1);
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if(!prune(entry)){
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heap.push(entry);
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}
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}
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}
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}
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if(!node1.IsLeaf() && node2.IsLeaf()){
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for( int i1=0; i1 < node1.EntryCount(); i1++){
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R_TreeInternalEntry<2> e1 = *(node1.GetInternalEntry(i1));
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for( int i2=0; i2<node2.EntryCount(); i2++){
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R_TreeLeafEntry<2,TupleId> e2 = *(node2.GetLeafEntry(i2));
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closestPairEntry entry(e1,level1+1,e2,level2+1);
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if(!prune(entry)){
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heap.push(entry);
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}
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}
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}
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}
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if(!node1.IsLeaf() && !node2.IsLeaf()){
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for( int i1=0; i1 < node1.EntryCount(); i1++){
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R_TreeInternalEntry<2> e1 = *(node1.GetInternalEntry(i1));
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for( int i2=0; i2<node2.EntryCount(); i2++){
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R_TreeInternalEntry<2> e2 = *(node2.GetInternalEntry(i2));
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||
|
|
closestPairEntry entry(e1,level1+1,e2,level2+1);
|
||
|
|
if(!prune(entry)){
|
||
|
|
heap.push(entry);
|
||
|
|
}
|
||
|
|
}
|
||
|
|
}
|
||
|
|
}
|
||
|
|
|
||
|
|
}
|
||
|
|
|
||
|
|
Tuple* produceNextTuple(){
|
||
|
|
while(!heap.empty() && !heap.top().isFinal()){
|
||
|
|
closestPairEntry e = heap.top();
|
||
|
|
heap.pop();
|
||
|
|
if(e.final1()){
|
||
|
|
R_TreeNode<2,TupleId> n2 = getNode2(e);
|
||
|
|
for(int i=0;i<n2.EntryCount();i++){
|
||
|
|
if(n2.IsLeaf()){
|
||
|
|
R_TreeLeafEntry<2,TupleId>
|
||
|
|
e2 = (R_TreeLeafEntry<2,TupleId>&)n2[i];
|
||
|
|
closestPairEntry entry(e,e2,e.getLevel2()+1);
|
||
|
|
if(!prune(entry)){
|
||
|
|
heap.push(entry);
|
||
|
|
}
|
||
|
|
} else {
|
||
|
|
R_TreeInternalEntry<2> e2 = (R_TreeInternalEntry<2>&)n2[i];
|
||
|
|
closestPairEntry entry(e,e2,e.getLevel2()+1);
|
||
|
|
if(!prune(entry)){
|
||
|
|
heap.push(entry);
|
||
|
|
}
|
||
|
|
}
|
||
|
|
}
|
||
|
|
} else if(e.final2()){
|
||
|
|
R_TreeNode<2,TupleId> n1 = getNode1(e);
|
||
|
|
for(int i=0;i<n1.EntryCount();i++){
|
||
|
|
if(n1.IsLeaf()){
|
||
|
|
R_TreeLeafEntry<2,TupleId>
|
||
|
|
e1 = (R_TreeLeafEntry<2,TupleId>&)n1[i];
|
||
|
|
closestPairEntry entry(e1,e.getLevel1()+1, e);
|
||
|
|
if(!prune(entry)){
|
||
|
|
heap.push(entry);
|
||
|
|
}
|
||
|
|
} else {
|
||
|
|
R_TreeInternalEntry<2> e1 = (R_TreeInternalEntry<2>&)n1[i];
|
||
|
|
closestPairEntry entry(e1,e.getLevel2()+1, e);
|
||
|
|
if(!prune(entry)){
|
||
|
|
heap.push(entry);
|
||
|
|
}
|
||
|
|
}
|
||
|
|
}
|
||
|
|
} else { // both are not final
|
||
|
|
R_TreeNode<2,TupleId> n1 = getNode1(e);
|
||
|
|
R_TreeNode<2,TupleId> n2 = getNode2(e);
|
||
|
|
insertPair(n1,e.getLevel1()+1,n2,e.getLevel2()+1);
|
||
|
|
}
|
||
|
|
|
||
|
|
|
||
|
|
}
|
||
|
|
if(heap.empty()){ // no more entries
|
||
|
|
return 0;
|
||
|
|
}
|
||
|
|
closestPairEntry e = heap.top();
|
||
|
|
heap.pop();
|
||
|
|
TupleId tid1 = e.getTid1();
|
||
|
|
TupleId tid2 = e.getTid2();
|
||
|
|
Tuple* t1 = r1->GetTuple(tid1,true);
|
||
|
|
Tuple* t2 = r2->GetTuple(tid2,true);
|
||
|
|
|
||
|
|
if(t1==0 || t2==0){
|
||
|
|
std::cerr << "TupleId stored in rtree not found" << endl;
|
||
|
|
std::cerr << " computing closest pair canceled" << endl;
|
||
|
|
count = k;
|
||
|
|
return 0;
|
||
|
|
}
|
||
|
|
Tuple* res = new Tuple(tt);
|
||
|
|
Concat(t1,t2,res);
|
||
|
|
t1->DeleteIfAllowed();
|
||
|
|
t2->DeleteIfAllowed();
|
||
|
|
count++;
|
||
|
|
return res;
|
||
|
|
|
||
|
|
}
|
||
|
|
|
||
|
|
|
||
|
|
R_TreeNode<2,TupleId> getNode1(closestPairEntry& e){
|
||
|
|
int level = e.getLevel1() +1;
|
||
|
|
bool isLeaf = level == t1->Height();
|
||
|
|
if(isLeaf){
|
||
|
|
int minEntries = t1->MinLeafEntries();
|
||
|
|
int maxEntries = t1->MaxLeafEntries();
|
||
|
|
R_TreeNode<2,TupleId> node(isLeaf, minEntries,maxEntries);
|
||
|
|
t1->GetNode(e.getPointer1(),node);
|
||
|
|
return node;
|
||
|
|
} else {
|
||
|
|
int minEntries = t1->MinInternalEntries();
|
||
|
|
int maxEntries = t1->MaxInternalEntries();
|
||
|
|
R_TreeNode<2,TupleId> node(isLeaf, minEntries,maxEntries);
|
||
|
|
t1->GetNode(e.getPointer1(),node);
|
||
|
|
return node;
|
||
|
|
}
|
||
|
|
}
|
||
|
|
|
||
|
|
|
||
|
|
R_TreeNode<2,TupleId> getNode2(closestPairEntry& e){
|
||
|
|
int level = e.getLevel2() +1;
|
||
|
|
bool isLeaf = level == t2->Height();
|
||
|
|
if(isLeaf){
|
||
|
|
int minEntries = t2->MinLeafEntries();
|
||
|
|
int maxEntries = t2->MaxLeafEntries();
|
||
|
|
R_TreeNode<2,TupleId> node(isLeaf, minEntries,maxEntries);
|
||
|
|
t2->GetNode(e.getPointer2(),node);
|
||
|
|
return node;
|
||
|
|
} else {
|
||
|
|
int minEntries = t2->MinInternalEntries();
|
||
|
|
int maxEntries = t2->MaxInternalEntries();
|
||
|
|
R_TreeNode<2,TupleId> node(isLeaf, minEntries,maxEntries);
|
||
|
|
t2->GetNode(e.getPointer2(),node);
|
||
|
|
return node;
|
||
|
|
}
|
||
|
|
}
|
||
|
|
|
||
|
|
bool prune(const closestPairEntry& e1) const{
|
||
|
|
if(k<0){ // all results required
|
||
|
|
return false;
|
||
|
|
}
|
||
|
|
if(heap.size() < (size_t)(k - count)){ // not enough entries
|
||
|
|
return false;
|
||
|
|
}
|
||
|
|
// TODO: implement pruing stategies
|
||
|
|
return false;
|
||
|
|
}
|
||
|
|
|
||
|
|
|
||
|
|
|
||
|
|
|
||
|
|
};
|
||
|
|
|
||
|
|
|
||
|
|
/*
|
||
|
|
Value Mapping
|
||
|
|
|
||
|
|
*/
|
||
|
|
|
||
|
|
|
||
|
|
|
||
|
|
int closestPairsVM (Word* args, Word& result, int message,
|
||
|
|
Word& local, Supplier s){
|
||
|
|
|
||
|
|
|
||
|
|
ClosestPairLocalInfo* li = (ClosestPairLocalInfo*) local.addr;
|
||
|
|
switch(message){
|
||
|
|
case OPEN: {
|
||
|
|
if(li) delete li;
|
||
|
|
CcInt* k = (CcInt*) args[4].addr;
|
||
|
|
if(k->IsDefined() ){
|
||
|
|
local.addr = new ClosestPairLocalInfo(
|
||
|
|
(R_Tree<2,TupleId>*) args[0].addr,
|
||
|
|
(Relation*) args[1].addr,
|
||
|
|
(R_Tree<2,TupleId>*) args[2].addr,
|
||
|
|
(Relation*) args[3].addr,
|
||
|
|
k->GetValue(),
|
||
|
|
nl->Second(GetTupleResultType(s)));
|
||
|
|
}
|
||
|
|
}
|
||
|
|
return 0;
|
||
|
|
case REQUEST:
|
||
|
|
result.addr=li?li->nextTuple():0;
|
||
|
|
return result.addr?YIELD:CANCEL;
|
||
|
|
case CLOSE:
|
||
|
|
if(li){
|
||
|
|
delete li;
|
||
|
|
local.addr=0;
|
||
|
|
}
|
||
|
|
}
|
||
|
|
return -1;
|
||
|
|
}
|
||
|
|
|
||
|
|
|
||
|
|
|
||
|
|
|